Ready-to-use tools for your discovery
The recently emerged therapeutic area that modulates the ubiquitin-proteasome system needs new and reliable chemistry. Booming biological assays in this field of drug discovery require the production of hundreds and thousands of new functional intermediates, bifunctional molecules, and new molecular glues. The time needed to produce new derivatives is crucial at any stage of the drug discovery program. We offer advanced synthetic chemistry support, including custom library design and synthesis.
The world’s largest collection
13 601 compounds
Amides of chloroacetic acids are soft alkylating agents and are among the most popular covalent binders. They are synthesized using amide coupling reaction of chloroacetic acids with primary and secondary amines:
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13 601 compounds for cherry-picking
Plated libraries in stock:
Besides cherry-picking from around 2 000 chloroacetamides from stock you can acquire a small library of these covalent ligands already plated in DMSO solution for fast supply. Conducted stability tests show that compounds remain in frozen DMSO solution at least within 1 year without any significant degradation.
Chloropropianates. Somewhat less reactive amides of α-chloropropionic acid can be also employed in discovery of selective covalent probes.
Synthesis of new covalent ligands. We offer a unique possibility to produce a customized library of chloroacetamides and / or chloropropianates. Based on our experience in making these covalent compounds and availability of over 40k amines in our stock we have enumerated a library of REAL (readily accessible) covalent compounds. We will produce at least 80% compounds from your selection within only 4-6.
The largest and most reliable source of novel covalent modifiers
133 117 compounds
Covalent screening has become an integral part of Drug Discovery and is now playing an essential role in hit finding, developing novel screening techniques, identifying new protein targets, and assessing their drugability.
We offer a wide range of covalent compound classes, from acrylamides and chloroacetamides to recently established niche classes whose stability and reactivity are yet to be studied. All compounds have been synthesized at Enamine using our in-house developed synthesis protocols and elaborated purification methods. This has allowed us to enumerate REAL Compound arrays – new covalent compounds that we can confidently synthesize within only 4 weeks.
We will be happy to help you with the covalentization of your scaffold, lead compound or simply give advice on covalent warhead attachment and its type.
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All in-stock Covalent Compounds 133k+
Acrylamides

Acrylamides are one of the most popular classes of covalent warheads used for irreversible binding to non-catalytic cysteines of target proteins to enhance pharmacological potency and selectivity. We offer the most diverse collection of the terminal and substituted acrylamides, enabling the discovery of new covalent binders with fine-tuning reactivity and affinity to a target.
Over 34k AcrylamidesChloroacetamides

Chloroacetamides are commonly used to develop new covalent probes for challenging targets. Ease of adducts interpretation and high reactivity are their main advantages. Recently synthesized more stable and less reactive 2-chloropropionamides and chlorofluoroacetamides represent a high potential for further discoveries.
Over 15k ChloroacetamidesSulfonyl Fluorides

Sulfonyl fluorides have emerged as new, but already well-established, promising covalent binders targeting multiple nucleophilic amino acids such as Tyr, Lys, Ser, His, and Thr. Recent advances, including the application of SuFEx electrophiles in proteomics screens, reveal new horizons for this type of warhead. Their high stability and moderate reactivity allow the discovery of highly selective irreversible binders.
Over 3k Sulfonyl FluoridesBoronics and Formyl Boronates

Boronic compounds occupy a special place in medicinal chemistry, including five FDA-approved drugs to date. Boron functional groups are considered covalent binders but are also often utilized in prodrugs, soft drugs, or as various carriers. We focused our efforts on the synthesis of new boronics that can be applied in the discovery of new selective Ser, Thr, and Lys reversible binders.
Over 5k Boronics and Formyl BoronatesEpoxides, Aziridines

Epoxides and aziridines received relatively little attention, at the same time being among the first developed covalent drugs, including a number of nature-derived antibiotics such as fosfomycin.
Both epoxides and aziridines react irreversibly through SN2 mechanism with the formation of adducts, often with Cys residues.
Vinyl Sulfones

Vinyl sulfones and vinyl sulfonamides are active binders for Lys and Cys residues. They react faster than acrylamides and have shown some preference for binding Lys over Cys. These warheads have been widely used in the development of new selective inhibitors of kinases and other enzymes. An extensive set of versatile vinyl sulfonyl derivatives covering a wide reactivity range is available from Enamine.
Over 5k Vinyl SulfonesCyanoacrylamides

Cyanoacrylamide is a reversible covalent warhead acting on Cys residues. The introduction of a small CN group into α-position of acrylamide dramatically alters its properties, making it a distinct class of covalent binders. Most of them are more active than corresponding acrylamides, but activity can be fine-tuned by appropriate substitution. The presence of the motif in drugs supports its significance in the future of drug discovery.
Activated Acetylenes

Activated acetylenes can irreversibly bind to cysteine residues. Selectivity, leading to fewer off-target interactions, could be achieved by tuning from acrylamide to propionamide derivatives. These warheads are well-validated and represented by approved drugs. Besides thousands of compounds in stock, we can quickly synthesize unique molecules on demand.
Aldehydes and Salicylic aldehydes

Aldehyde is a common chemical functionality, able to target both catalytic and noncatalytic cysteine residues by forming a reversible covalent bond. Also, they are able to target lysines by the formation of Schiff bases. Salicylic aldehydes are especially versatile in the latter case due to the enhanced stability of covalent adducts. Previously aldehydes were unpopular in drug discovery programs due to potential metabolic liability, but recent examples show surprisingly stable aldehydes passing clinical trials.
Disulfides

Disulfide moiety can form a covalent bond with Cys residues by the thiol-disulfide exchange. Disulfide bridges are an important feature of cysteines in biological systems. Disulfide tethering is a useful technique used for the identification of hit fragments.
Strained Cyclobutanes

Bicyclo[1.1.0]butanes (BCB) recently emerged as a new class of thiol-reactive electrophiles and analogs of widely used acrylamides. Ring strain is utilized as a driving force for highly selective covalent tethering to nucleophilic amino acid residues. Hundreds of bicyclobutane carboxylic amides have been synthesized at Enamine and even more are to come from new syntheses
Over 700 Strained CyclobutanesEpigenetics
A valuable tool for chemical genomics, epigenetic target identification in pharmacogenomics, and other biological applications
Epigenetic modifications - including acetylation, methylation, phosphorylation, and ubiquitination among others - are known to alter the accessibility of DNA to transcription machinery and therefore influence gene expression. Current research is uncovering the extent of the influence of epigenetics in disease states and continues to provide a wealth of novel therapeutic targets.
- Contains about 74 bioactive compounds with known modulate activity of a variety of epigenetic 'writers', 'erasers' and 'reader' proteins used for epigenetics research and associated assays
- Supported with full bioactivity annotation, pathway indications and all related chemical structure information (structure, CAS, smiles, molecular parameters)
- NMR and HPLC validated to ensure the highest purity
- Supplied in 96 or 384-well plates, ready for shipping
- Minimal preparation – just peel, dilute & transfer to assay plate
Target distribution

Kinase Inhibitors
Ideal tool for chemical genomics, assay development and other pharmacological applications
Investigations in the field of kinase inhibitors rapidly progress in oncology, autoimmune, inflammatory disease and degenerative disorders. Exploration of emerging targets and new strategies for kinase inhibitor discovery provides the opportunity for developing novel, efficient therapeutic agents.
- Collection contains carefully selected 81 specific kinase inhibitors
- Supported with full bioactivity annotation, pathway indications and all related chemical structure information (structure, CAS, smiles, molecular parameters)
- NMR and HPLC validated to ensure the highest purity
- Supplied in 96 or 384-well plates, ready for shipping
- Minimal preparation – just peel, dilute & transfer to assay plate
Target distribution
