Cysteine focused Covalent Fragments
Library of Cys-specific covalent electrophilic binders
3 200 compounds
Covalent chemical probes become an important tool in drug discovery within last few years. The impressive number of successful applications in protein drugability assessment, especially focusing on Cys residue, brought aspiration to discovery and synthesis of new covalent modifiers.
We used deep knowledge-based approach to design and synthesize our cysteine focused fragment library. Careful choice of covalent warheads based on their reactivity was performed by experienced chemists and reflected a small set of specific structural filters. Electrophilic fragments selected by structural filters were then analyzed to remove any molecules with trivial or unwanted structural features. The resulting set was refined with Ro3 criteria applied to “core structures” to yield 3 200 fragments able to form covalent bonds with cysteine residues.
Typical Formats
Catalog No.
CYS-3200-10-Y-100
Compounds
3 200 10 plates
Amount
10 µL of 100 mM DMSO solutions
Plates and formats
384-well microplates, Echo qualified Labcyte, 320 compounds per plate
Price
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Catalog No.
CYS-3200-25-Y-20
Compounds
3 200 10 plates
Amount
25 µL of 20 mM DMSO solutions
Plates and formats
384-well plates, Greiner Cat. No. 781280, 1, 2 and 23, 24 columns empty, 320 compounds per plate
Price
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Catalog No.
CYS-3200-50-X-20
Compounds
3 200 40 plates
Amount
50 µL of 20 mM DMSO solutions
Plates and formats
96-well plates, 2D-barcoded Matrix microtubes capped with sepraseals
Price
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Catalog No.
CYS-3200
Compounds
3 200
Amount
Custom
Plates and formats
Any custom format
Price
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Hits derived from this library can be easily followed with analogues from stock or either synthesis of new compounds through REAL Database technology.
Key features
- Only well-validated covalent warheads, which can form easy to interpret adducts.
- Contains fragments with described reactivity.
- Attractive scaffolds, derived from the latest core building blocks.
The following warheads were used for the library design:
- Acrylamides - 1 200
- Dimethylamine functionalized acrylamides – 480
- Chloroacetamides – 800 & 2-Chloropropionamides – 480
- Butynamides - 240
Examples of the molecules in Cysteine focused Library
