PAINS Library

Special diverse selection of frequent hitters

320 compounds

Pan-Assay Interference Compounds (PAINS) are the most recognized filters among medicinal chemists. Since first publication in 2010 by John Bell these filters have become industry standard in Drug Discovery. While carefully removing all PAINS-related compounds from Enamine libraries we realized that these compounds can be very useful in HTS assay set-up & validation.

 

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Special diversity set of PAINS available for prompt delivery in various plated formats including the most popular listed below:

Typical Formats

Catalog No.
Compounds
Amount
Format

Catalog No.

PAINS-320-10-Y-10

Compounds

320
1 plate

Amount

10 μL of 10 mM DMSO solutions

Plates and formats

384-well acoustic plates, Labcyte #PP-0200, last two columns empty;

Catalog No.

PAINS-320-50-Y-10

Compounds

320
1 plate

Amount

50 μL of 10 mM DMSO solutions

Plates and formats

384-well plates, Greiner #784201, 1, 2 and 23, 24 columns empty; 320 compounds per plate

Catalog No.

PAINS-320-100-X-10

Compounds

320
4 plates

Amount

100 μL of 10 mM DMSO solutions

Plates and formats

96-well plates, Greiner #65021, 1 and 12 columns empty; 80 compounds per plate

Catalog No.

PAINS-320

Compounds

320

Amount

Custom

Plates and formats

Any custom format

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PAINS Library

Library code: PAINS-320

Version: 22 November 2021

320 compounds

Library design

The design is based on substructural motifs of known PAINS compounds. We used originally reported PAINS filters to identify a set of over 80k in-stock compounds. This set was clustered using fingerprint-based approach and Tanimoto similarity distance calculations. The most populated clusters with at least 5 compounds were extracted and one representative example was selected from each cluster resulting in a library of 320 compounds. The library of most diverse 320 PAINS is available in plate format for your convenience. Examples are given below.

Key features

  • Represents the most common false positives
  • Substructure & scaffold diversity
  • All compounds suitable for storage as DMSO solutions

Example of structures and their specific PAINS filters

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